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Publications of Markus Geimer

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 All BibTeX Entries

 

2019

  • C. Feld, S. Convent, M.-A. Hermanns, J. Protze, M. Geimer, B. Mohr
    Score-P and OMPT: Navigating the Perils of Callback-Driven Parallel Runtime Introspection
    Proc. of the 15th International Workshop on OpenMP (IWOMP 2019, September 11–13, 2019, Auckland, New Zealand) / ed.: X. Fan, B.R. de Supinski, O. Sinnen, N. Giacaman, Lecture Notes in Computer Science Vol. 11718, Springer, Cham, pp. 21–35, 2019
  • DOI       BibTeX       

 

2018

  • W. Sharples, I. Zhukov, M. Geimer, K. Görgen, S. Lührs, T. Breuer, B. Naz, K. Kulkarni, S. Brdar, S. Kollet
    A run control framework to streamline profiling, porting, and tuning simulation runs and provenance tracking of geoscientific applications
    Geoscientific Model Development, Vol. 11 (7), pp. 2875–2895, July 2018
  • DOI       BibTeX       

 

2017

  • M.-A. Hermanns, M. Geimer, B. Mohr, F. Wolf
    Trace-based Detection of Lock Contention in MPI One-Sided Communication
    Tools for High Performance Computing 2016, Proc. of the 10th Parallel Tools Workshop, Stuttgart, Germany, October 2016 / ed.: C. Niethammer, J. Gracia, T. Hilbrich, A. Knüpfer, M.M. Resch, W.E. Nagel, pp. 97–114, Springer, 2017
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  • D. Tafani, M. Schlütter, M. Geimer, B. Mohr, M. Nachtmann, J. Gracia
    The Mont-Blanc Project: Second Phase successfully finished
    Innovatives Supercomputing in Deutschland (inSiDE), Vol. 15 (1), pp. 134–141, 2017
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2016

  • D. Alvarez, A. O'Cais, M. Geimer, K. Hoste
    Scientific Software Management in Real Life: Deployment of Easybuild on a Large Scale System
    Proc. of the Third Intl. Workshop on HPC User Support Tools (HUST '16), IEEE Press, Piscataway, NJ, USA, pp. 31–40, November 2016
  • DOI       BibTeX       
  • D. Böhme, M. Geimer, L. Arnold, F. Voigtländer, F. Wolf
    Identifying the root causes of wait states in large-scale parallel applications
    ACM Transactions on Parallel Computing, Vol. 3 (2), pp. Article No. 11, 24 pages, July 2016
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2015

  • I. Zhukov, C. Feld, M. Geimer, M. Knobloch, B. Mohr, P. Saviankou
    Scalasca v2: Back to the Future
    Proc. of Tools for High Performance Computing 2014, ISBN 978-3-319-16011-5, Springer, pp. 1-24, 2015
  • DOI       BibTeX       

 

2014

  • C. Rössel, B. Mohr, M. Geimer, D. Becker
    Successful Technology Transfer with Siemens – The RAPID Project
    Innovatives Supercomputing in Deutschland (inSiDE), Vol. 12 (3), pp. 72–75, 2014
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  • M. Geimer, K. Hoste, R. McLay
    Modern scientific software management using EasyBuild and Lmod
    Proc. of the First Intl. Workshop on HPC User Support Tools (HUST '14), ISBN 978-1-4799-7023-0, IEEE Press, Piscataway, NJ, USA, pp. 41–51, November 2014
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  • F. Gasper, K. Görgen, P. Shrestha, M. Sulis, J. Rihani, M. Geimer, S. Kollet
    Implementation and scaling of the fully coupled Terrestrial Systems Modeling Platform (TerrSysMP v1.0) in a massively parallel supercomputing environment – a case study on JUQUEEN (IBM Blue Gene/Q)
    Geoscientific Model Development, Vol. 7 (5), pp. 2531–2543, October 2014
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  • G. Mao, D. Böhme, M.-A. Hermanns, M. Geimer, D. Lorenz, F. Wolf
    Catching Idlers with Ease: A Lightweight Wait-State Profiler for MPI Programs
    EuroMPI '14: Proc. of the 21th European MPI Users' Group Meeting, Kyoto, Japan, ISBN 978-1-4503-2875-3, ACM, pp. 103–108, September 2014
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  • M. Schlütter, P. Philippen, L. Morin, M. Geimer, B. Mohr
    Profiling Hybrid HMPP Applications with Score-P on Heterogeneous Hardware
    Parallel Computing: Accelerating Computational Science and Engineering (CSE) / ed.: M. Bader, A. Bode, H.-J. Bungartz, M. Gerndt, G.R. Joubert, F.J. Peters, Advances in Parallel Computing Vol. 25, ISBN 978-1-61499-381-0, IOS Press, pp. 773 - 782, March 2014
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  • B. Krammer, H. Mix, M. Geimer
    Parallel Programming for Heterogeneous Architectures
    Parallel Computing: Accelerating Computational Science and Engineering (CSE) / ed.: M. Bader, A. Bode, H.-J. Bungartz, M. Gerndt, G.R. Joubert, F.J. Peters, Advances in Parallel Computing Vol. 25, ISBN 978-1-61499-381-0, IOS Press, pp. 731–732, March 2014
  • DOI       BibTeX       

 

2013

  • A. Knüpfer, R. Dietrich, J. Doleschal, M. Geimer, M.-A. Hermanns, C. Rössel, R. Tschüter, B. Wesarg, F. Wolf
    Generic Support for Remote Memory Access Operations in Score-P and OTF2
    Tools for High Performance Computing 2012, Proc. of the 6th Parallel Tools Workshop, Stuttgart, Germany, September 2012 / ed.: A. Cheptsov, S. Brinkmann, J. Gracia, M.M. Resch, W.E. Nagel, pp. 57–74, Springer, 2013
  • DOI       BibTeX       
  • D. Becker, M. Geimer, R. Rabenseifner, F. Wolf
    Extending the scope of the controlled logical clock
    Cluster Computing, Vol. 16 (1), pp. 171–189, March 2013
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2012

  • M. Geimer, P. Saviankou, A. Strube, Z. Szebenyi, F. Wolf, B.J.N. Wylie
    Further improving the scalability of the Scalasca toolset
    Proc. of PARA 2010: State of the Art in Scientific and Parallel Computing, Part II: Minisymposium Scalable tools for High Performance Computing, Reykjavik, Iceland, June 6–9 2010, Lecture Notes in Computer Science Vol. 7134, ISBN 978-3-642-28144-0, Springer, pp. 463–474, 2012
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  • D. Eschweiler, M. Wagner, M. Geimer, A. Knüpfer, W.E. Nagel, F. Wolf
    Open Trace Format 2 - The Next Generation of Scalable Trace Formats and Support Libraries
    Proc. of the Intl. Conference on Parallel Computing (ParCo), Ghent, Belgium, August 30 – September 2 2011, Advances in Parallel Computing Vol. 22, ISBN 978-1-61499-040-6, IOS Press, pp. 481–490, 2012
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  • A. Knüpfer, C. Rössel, D. an Mey, S. Biersdorff, K. Diethelm, D. Eschweiler, M. Geimer, M. Gerndt, D. Lorenz, A.D. Malony, W.E. Nagel, Y. Oleynik, P. Philippen, P. Saviankou, D. Schmidl, S.S. Shende, R. Tschüter, M. Wagner, B. Wesarg, F. Wolf
    Score-P – A Joint Performance Measurement Run-Time Infrastructure for Periscope, Scalasca, TAU, and Vampir
    Tools for High Performance Computing 2011, Proc. of the 5th Parallel Tools Workshop, Dresden, Germany, September 2011, pp. 79–91, Springer, 2012
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  • M.-A. Hermanns, M. Geimer, B. Mohr, F. Wolf
    Scalable detection of MPI-2 remote memory access inefficiency patterns
    Intl. Journal of High Performance Computing Applications (IJHPCA), Vol. 26 (3), pp. 227–236, August 2012
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  • D. Schmidl, P. Philippen, D. Lorenz, C. Rössel, M. Geimer, D. an Mey, B. Mohr, F. Wolf
    Performance Analysis Techniques for Task-Based OpenMP Applications
    Proc. of the 8th International Workshop on OpenMP (IWOMP), Rome, Italy, Berlin / Heidelberg, Lecture Notes in Computer Science Vol. 7312, ISBN 978-3-642-30960-1, Springer, pp. 196–209, June 2012
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  • D. Böhme, B.R. de Supinski, M. Geimer, M. Schulz, F. Wolf
    Scalable Critical-Path Based Performance Analysis
    Proc. of the 26th IEEE International Parallel and Distributed Processing Symposium (IPDPS), Shanghai, China, IEEE, pp. 1330–1340, May 2012
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  • D. Böhme, M. Geimer, F. Wolf
    Characterizing Load and Communication Imbalance in Large-Scale Parallel Applications
    Proc. of the 26th IEEE International Parallel and Distributed Processing Symposium Workshops and PhD Forum (IPDPSW), Shanghai, China, ISBN 978-1-4673-0974-5, IEEE, pp. 2538–2541, May 2012
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2011

  • M. Geimer, M.-A. Hermanns, C. Siebert, F. Wolf, B.J.N. Wylie
    Scaling Performance Tool MPI Communicator Management
    Proc. of the 18th European MPI Users' Group Meeting (EuroMPI), Santorini, Greece, Lecture Notes in Computer Science Vol. 6960, ISBN 978-3-642-2448-3, Springer, pp. 178–187, September 2011
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  • B.J.N. Wylie, M. Geimer
    Large-scale performance analysis of PFLOTRAN with Scalasca
    Proc. of the 53rd Cray User Group meeting, Fairbanks, AK, USA, Cray User Group Inc., May 2011
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2010

  • M. Geimer, F. Wolf, B.J.N. Wylie, D. Becker, D. Böhme, W. Frings, M.-A. Hermanns, B. Mohr, Z. Szebenyi
    Recent Developments in the Scalasca Toolset
    Tools for High Performance Computing 2009, Proc. of the 3rd Parallel Tools Workshop, Dresden, Germany, September 2009 / ed.: M.S. Müller, M.M. Resch, W.E. Nagel, A. Schulz, 4, pp. 39–51, Springer, 2010
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  • B.J.N. Wylie, M. Geimer, B. Mohr, D. Böhme, Z. Szebenyi, F. Wolf
    Large-scale performance analysis of Sweep3D with the Scalasca toolset
    Parallel Processing Letters, Vol. 20 (4), pp. 397–414, December 2010
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  • D. Böhme, M. Geimer, F. Wolf, L. Arnold
    Identifying the root causes of wait states in large-scale parallel applications
    Proc. of the 39th International Conference on Parallel Processing (ICPP), San Diego, CA, USA, ISBN 978-1-4244-7913-9, IEEE, pp. 90–100, September 2010, Best Paper Award
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  • D. Becker, M. Geimer, R. Rabenseifner, F. Wolf
    Synchronizing the Timestamps of Concurrent Events in Traces of Hybrid MPI/OpenMP Applications
    Proc. of IEEE International Conference on Cluster Computing (CLUSTER), Heraklion, Greece, ISBN 978-0-7695-4220-1, IEEE, pp. 38–47, September 2010
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  • A. Knüpfer, M. Geimer, J. Spazier, J. Schuchart, M. Wagner, D. Eschweiler, M.S. Müller
    A generic attribute extension to OTF and its use for MPI replay
    Proc. of the International Conference on Computational Science (ICCS), Procedia Computer Science Vol. 1, Elsevier, pp. 2109–2118, May 2010
  • DOI       BibTeX       
  • B.J.N. Wylie, D. Böhme, W. Frings, M. Geimer, B. Mohr, Z. Szebenyi, D. Becker, M.-A. Hermanns, F. Wolf
    Scalable performance analysis of large-scale parallel applications on Cray XT systems with Scalasca
    Proc. 52nd Cray User Group Meeting, Edinburgh, Scotland, Cray User Group Incorporated, May 2010
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  • M. Geimer, F. Wolf, B.J.N. Wylie, E. Ábrahám, D. Becker, B. Mohr
    The Scalasca performance toolset architecture
    Concurrency and Computation: Practice and Experience, Vol. 22 (6), pp. 702–719, April 2010
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  • D. Böhme, M.-A. Hermanns, M. Geimer, F. Wolf
    Performance Simulation of Non-blocking Communication in Message-Passing Applications
    Proc. of the 2nd Workshop on Productivity and Performance (PROPER) in conjunction with Euro-Par 2009, Delft, The Netherlands, Lecture Notes in Computer Science Vol. 6043, Springer, pp. 208–217, March 2010
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  • F. Wolf, D. Böhme, M. Geimer, M.-A. Hermanns, B. Mohr, Z. Szebenyi, B.J.N. Wylie
    Performance Tuning in the Petascale Era
    Proc. of the John von Neumann Institute for Computing (NIC) Symposium 2010, Juelich, Germany / ed.: G. Münster, D. Wolf, M. Kremer, Forschungszentrum Jülich, IAS Series Vol. 3, ISBN 978-3-89336-606-4, John von Neumann-Institut for Computing, pp. 339–346, February 2010
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2009

  • M.-A. Hermanns, M. Geimer, B. Mohr, F. Wolf
    Scalable Detection of MPI-2 Remote Memory Access Inefficiency Patterns
    Proc. of the 16th European PVM/MPI Users' Group Meeting (EuroPVM/MPI), Espoo, Finland, Lecture Notes in Computer Science Vol. 5759, ISBN 978-3-642-03769-6, Springer, pp. 31–41, September 2009
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  • M. Geimer, F. Wolf, B.J.N. Wylie, B. Mohr
    A scalable tool architecture for diagnosing wait states in massively parallel applications
    Parallel Computing, Vol. 35 (7), pp. 375–388, July 2009
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  • M. Geimer, S.S. Shende, A.D. Malony, F. Wolf
    A Generic and Configurable Source-Code Instrumentation Component
    Proc. of the International Conference on Computational Science (ICCS), Baton Rouge, LA, USA / ed.: G. Allen, J. Nabrzyski, E. Seidel, G.D. van Albada, J. Dongarra, P.M.A. Sloot, Lecture Notes in Computer Science Vol. 5545, ISBN 978-3-642-01972-2, Springer, pp. 696–705, May 2009
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  • M.-A. Hermanns, M. Geimer, F. Wolf, B.J.N. Wylie
    Verifying Causality Between Distant Performance Phenomena in Large-Scale MPI Applications
    Proc. of the 17th Euromicro International Conference on Parallel, Distributed, and Network-Based Processing (PDP), Weimar, Germany, ISBN 978-0-7695-3544-9, IEEE, pp. 78–84, February 2009
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2008

  • B.J.N. Wylie, M. Geimer, F. Wolf
    Performance measurement and analysis of large-scale parallel applications on leadership computing systems
    Scientific Programming, Vol. 16 (2-3), pp. 167–181, 2008
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  • F. Wolf, B.J.N. Wylie, E. Ábrahám, D. Becker, W. Frings, K. Fürlinger, M. Geimer, M.-A. Hermanns, B. Mohr, S. Moore, M. Pfeifer, Z. Szebenyi
    Usage of the SCALASCA Toolset for Scalable Performance Analysis of Large-Scale Parallel Applications
    Tools for High Performance Computing, Proc. of the 2nd Parallel Tools Workshop, Stuttgart, Germany, July 2008, pp. 157–167, Springer, 2008
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  • M. Geimer, F. Wolf, B.J.N. Wylie, E. Ábrahám, D. Becker, B. Mohr
    The SCALASCA Performance Toolset Architecture
    International Workshop on Scalable Tools for High-End Computing (STHEC), Kos, Greece, pp. 51–65, June 2008
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  • M.-A. Hermanns, M. Geimer, F. Wolf, B.J.N. Wylie
    Verifying Causal Connections between Distant Performance Phenomena in Large-Scale Message-Passing Applications
    Technical Report, FZJ-JSC-IB-2008-05, Forschungszentrum Jülich, April, 2008
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  • F. Wolf, D. Becker, M. Geimer, B.J.N. Wylie
    Scalable Performance Analysis Methods for the Next Generation of Supercomputers
    Proc. of the John von Neumann Institute for Computing (NIC) Symposium, Jülich, Germany, NIC-Series Vol. 39, ISBN 978-3-9810843-5-1, pp. 315–322, February 2008
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2007

  • M. Geimer, F. Wolf, A. Knüpfer, B. Mohr, B.J.N. Wylie
    A Parallel Trace-Data Interface for Scalable Performance Analysis
    Proc. of the 8th International Workshop on State-of-the-Art in Scientific and Parallel Computing (PARA), Umeå, Sweden, June 2006, Lecture Notes in Computer Science Vol. 4699, ISBN 978-3-540-75754-2, Springer, pp. 398–408, 2007
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  • B.J.N. Wylie, F. Wolf, B. Mohr, M. Geimer
    Integrated Runtime Measurement Summarisation and Selective Event Tracing for Scalable Parallel Execution Performance Diagnosis
    Proc. of the 8th International Workshop on State-of-the-Art in Scientific and Parallel Computing (PARA), Umeå, Sweden, June 2006, Lecture Notes in Computer Science Vol. 4699, ISBN 978-3-540-75754-2, Springer, pp. 460–469, 2007
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  • M. Geimer, B. Kuhlmann, F. Pulatova, F. Wolf, B.J.N. Wylie
    Scalable Collation and Presentation of Call-Path Profile Data with CUBE
    Proc. of the Conference on Parallel Computing (ParCo), Aachen/Jülich, Germany, ISBN 978-1-58603-796-3, pp. 645–652, September 2007, Minisymposium Scalability and Usability of HPC Programming Tools
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  • B.J.N. Wylie, M. Geimer, M. Nicolai, M. Probst
    Performance analysis and tuning of the XNS CFD solver on BlueGene/L
    Proc. of the 14th European PVM/MPI Users' Group Meeting (EuroPVM/MPI), Paris, France, Lecture Notes in Computer Science Vol. 4757, Springer, pp. 107–116, September 2007
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  • D. Becker, F. Wolf, W. Frings, M. Geimer, B.J.N. Wylie, B. Mohr
    Automatic Trace-Based Performance Analysis of Metacomputing Applications
    Proc. of the International Parallel and Distributed Processing Symposium (IPDPS), Long Beach, CA, USA, ISBN 1-4244-0909-8, IEEE, March 2007
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2006

  • M. Geimer, F. Wolf, B.J.N. Wylie, B. Mohr
    Scalable Parallel Trace-Based Performance Analysis
    Innovatives Supercomputing in Deutschland (inSiDE), Vol. 4 (2), pp. 16–19, 2006
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  • O. Abert, M. Geimer, S. Müller
    Direct and Fast Ray Tracing of NURBS Surfaces
    Proc. of the IEEE Symposium on Interactive Ray Tracing, Salt Lake City, UT, USA, IEEE Computer Society, pp. 161–168, September 2006
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  • M. Geimer, F. Wolf, B.J.N. Wylie, B. Mohr
    Scalable Parallel Trace-Based Performance Analysis
    Proc. of the 13th European PVM/MPI Users' Group Meeting (EuroPVM/MPI), Bonn, Germany, Lecture Notes in Computer Science Vol. 4192, ISBN 978-3-540-39110-4, Springer, pp. 303–312, September 2006
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  • M. Geimer
    Interaktives Ray Tracing
    PhD thesis, Universität Koblenz-Landau, Germany, February 2006, Der Andere Verlag, Tönning, ISBN 3-89959-425-8
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2005

  • M. Geimer, O. Abert
    Interactive Ray Tracing of Trimmed Bicubic Bézier Surfaces without Triangulation
    Proc. of the 13th Intl. Conference in Central Europe on Computer Graphics, Visualization and Computer Vision (WSCG), Plzeň, Czech Republic, ISBN 80-903100-7-9, University of West Bohemia, pp. 71–78, February 2005
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2003

  • M. Geimer, S. Müller
    A Cross-Platform Framework for Interactive Ray Tracing
    Tagungsband Graphiktag der Gesellschaft für Informatik, Frankfurt/Main, Germany, pp. 25–34, September 2003
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