Quantitative Microbial Phenotyping

About

Our research focuses on the optimization of microbial strains and production processes using high-throughput experiments, quantitative omics technologies, and process modeling.

We utilize our so-called Mini Pilot Plant technology, based on microtiter plate experiments, to develop new workflows for faster in depth phenotyping of selected prokaryotic and eukaryotic chassis organisms. Additionally we develop untargeted optimization strategies through automated adaptive laboratory evolution. Our main analytical tools are proteome, metabolome and 13C/15N metabolic flux analysis based on LC-QToF and GC/GC-ToF mass spectrometry.

Recently, we started to develop novel robotic workflows for the automated, rational construction of industrially established prokaryotes such as Escherichia coli, Corynebacterium glutamicum or Pseudomononas putida. Their genetic blueprints are well known and reliable molecular cloning methods are waiting to be automated.

In our application, we focus on a microbial upcycling approaches from residual biomass to establish new or improved utilization chains for monomer production. For those strains with high production potential, bioprocess development at lab-scale is performed and further supported by detailed process modeling to provide the basis for a robust performance evaluation.

Research Topics

  • Automation technologies for targeted and untargeted strain engineering
  • Quantitative omics analytics for metabolic and bioprocess modelling
  • Synthetic mixed cell cultures based on streamlined genomes
  • Microbial upcycling of plant-based feedstock for monomer production

Contact

Dr.-Ing. Stephan Noack

IBG-1

Building 15.4 / Room 308

+49 2461/61-6044

E-Mail

Our group in May 2022

Members

Dr.-Ing. Stephan NoackGroup leader of Quantitative Microbial PhenotypingBuilding 15.4 / Room 308+49 2461/61-6044

Scientific staff

Dr. Julia TenhaefScientific staffBuilding 15.4 / Room 308+49 2461/61-96939

Technicians

Jochem GätgensTechnicianBuilding 15.4 / Room R 256+49 2461/61-3948
Bianca KleinTechnicianBuilding 15.4 / Room R 256+49 2461/61-3948
Tobias LatourEngineerBuilding 15.4 / Room 264+49 2461/61-3958
Moritz-Fabian MüllerEngineerBuilding 15.4 / Room 251+49 2461/61-2573

PhD students

Lars HallePh.D. studentBuilding 15.4 / Room 136+49 2461/61-5133
Tabea HelmPh.D. studentBuilding 15.4 / Room 136+49 2461/61-8646
Jochen NießerPh.D. studentBuilding 15.4 / Room 251+49 2461/61-3959
Tobias RoschPh.D. studentBuilding 15.4 / Room 251+49 2461/61-3959
Tim StoltmannPh.D. studentBuilding 15.4 / Room 136+49 2461/61-3505

Students

Marvin DoserMaster studentBuilding 15.4 / Room 264+49 2461/61-3958
Lukas OsswaldMaster studentBuilding 15.4 / Room 254+49 2461/61-2611
Luisa WachtendonkMaster studentBuilding 15.4 / Room 251+49 2461/61-2573

Last Modified: 30.04.2024